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New Research Sheds Light on Diversity in the Deep Sea
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User Support Analysis Group
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Webinar: MycoCosm Tutorial
… submit metadata and assembly at  https://gold.jgi.doe.gov 10.  Q: Is there any possibility to search for … and quantifications, and shipping. A: Absolutely! 12.  Q: Is it possible to use the Browse page tool to … track and may be included in GenBank submissions 16.  Q: Is there any information on the promoter of genes …
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Jeremy Schmutz
… co-led the team that finished the DOE human chromosomes 5, 16, and 19. Following the completion of the Human Genome … genome architecture of sugarcane. Nature 628, 804–810. Sreedasyam, A., Plott, C., MdS Hossain, J. T., Lovell, … of agronomically valuable loci. Nature Biotechnology 38:1203-1210. Chen, ZJ et al. 2020. Genomic diversifications of …
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A Redesign for Yeast’s Genome, Chromosome by Chromosome
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Katherine Louie
… analysis, creation of large metabolite databases by running 1000s of metabolite standards, and development of … untargeted analysis pipelines.  Beyond profiling over 10k samples/year, Dr. Louie and her team work with other JGI … Sciences and Chemical Engineering.  DOI: 10.1016/b978-0-12-409547-2.14834-6 4. Roth MS, Gallaher SD, Westcott DJ, …
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Introducing New Members of the JGI User Executive Committee
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Rex Malmstrom
… Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ growth … of the arbuscular mycorrhizal symbiosis. Nature Plants 10, 673–688 Vyshenska et al. 2023. A standardized … for stable isotope probing metagenomics. mSystems 8:e01280-22. Volland et al. 2022.   A centimeter-long bacterium …
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Marine Microbe Contains Multitudes
… and colleagues set sail on research cruises in 2015 and 2016. At Station ALOHA , site of the 30-years-long Hawaii … they have used the sequence of a “marker gene,” namely the 16S ribosomal RNA (rRNA) gene, to mark or identify microbial species. All SAR324 have very closely related 16S rRNA genes, but these genes mask the striking diversity …
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Institutional User Agreements
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… combined with nearly 5,000 publicly available ones and 1,100 metagenome-assembled genomes (MAGs) reconstructed from …
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JGI Pitches 2022 Visiting Faculty Program Collaborations
… Completed VFP applications are due on January 12, 2022. Faculty interested in developing proposals with …
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