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… v12 was first deployed (as the foundation for Phytozome v10) back in 2014.  Several components of that codebase are … grab genomes based on which version of Phytozome (e.g., 9, 10, 11, 12) they were first released in.  Are any genomes …

… analysis, creation of large metabolite databases by running 1000s of metabolite standards, and development of … untargeted analysis pipelines.  Beyond profiling over 10k samples/year, Dr. Louie and her team work with other JGI … natural products. Proc Natl Acad Sci U S A. 2021;118. doi:10.1073/pnas.2019855118 2. Murphy KM, Edwards J, Louie KB, …

… Gene Atlas in  Nucleic Acids Research . The project spans 15 years and involves more than 17 research groups. The team … Avinash: In the initial planning phase, there were about 10 groups that came together to standardize the experimental … been publicly available since 2018. There were more than 15 citations even before this was published, and people …

… falling. As  published online in  Nature Plants  on July 15, researchers have developed multiplexed assays — … bioenergy and bioengineering applications. “We worked with 10 species ranging from grasses to broccoli and trees like … binding maps for 360 transcription factors across 10 plant species, illuminating thousands of regulatory …

… Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ growth … of the arbuscular mycorrhizal symbiosis. Nature Plants 10, 673–688 Vyshenska et al. 2023. A standardized … linked to ocean anoxia and nitrogen loss. Nature 536 (7615), 179 Hatzenpichler, R. et al. 2016. Visualizing in situ …

… combined with nearly 5,000 publicly available ones and 1,100 metagenome-assembled genomes (MAGs) reconstructed from …