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iPHoP: A Matchmaker for Phages and their Hosts

… are microbes like bacteria, not humans. With metagenomic sequencing, researchers have found more of these viruses …

JGI@25: A Single Cell, Myriad Microbial Discoveries

… cell. Several years later, the continuing single cell sequencing collaboration between the JGI and Bigelow Lab led …

How Filamentous Fungi Sense Food

… and optimized by Ronan O’Malley, who leads the JGI’s Sequencing Technologies group. DAP-seq allowed the team to …

Viral Genomics Group

High quality draft genome sequences of Pseudomonas fulva DSM 17717T, Pseudomonas parafulva DSM 17004T and Pseudomonas cremoricolorata DSM 17059T type strains

Complete genome sequence of Thioalkalivibrio paradoxus type strain ARh 1T, an obligately chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacterium isolated from a Kenyan soda lake

Genome sequence of Phaeobacter inhibens type strain (T5T), a secondary metabolite producing representative of the marine Roseobacter clade, and emendation of the species description of Phaeobacter inhibens

Analyses of expressed sequence tags from the maize foliar pathogen Cercospora zeae-maydis identify novel genes expressed during vegetative, infectious, and reproductive growth

Complete Genome Sequences of Desulfosporosinus orientis DSM765T, Desulfosporosinus youngiae DSM17734T, Desulfosporosinus meridiei DSM13257T, and Desulfosporosinus acidiphilus DSM22704T

Draft genome sequences of two bacterial type strains isolated from a methanogenic bioreactor: Ruminiclostridium sufflavum DSM 19573T and Anaerosphaera aminiphila DSM 21120T

Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts

… on marine mangrove systems, and he was looking for sulfur-oxidizing symbionts in sulfur-rich mangrove sediments not … over the next couple of years, and realized it was a sulfur-oxidizing prokaryote. Silvina Gonzalez-Rizzo, an associate … a co-first author on the study, performed the 16S rRNA gene sequencing to identify and classify the prokaryote. “I …

Toward More Reproducible, Reusable Stable Isotope Probing Experiments

… catalyzed by microbial communities. By pairing RNA or DNA sequencing with tracings of stable, heavy isotopes, SIP … (BER) missions. The JGI provides integrated high-throughput sequencing and computational analysis that enable …

Lawrence Berkeley National Laboratory is a U.S. DOE Office of Science
national laboratory managed by the University of California.