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… v12 was first deployed (as the foundation for Phytozome v10) back in 2014.  Several components of that codebase are … grab genomes based on which version of Phytozome (e.g., 9, 10, 11, 12) they were first released in.  Are any genomes …

… Scientific Computing Center (NERSC) (https://ror.org/05v3mvq14), are DOE Office of Science User Facilities operated under Contract No. DE-AC02-05CH11231. This work also received support from the Genomic … Research (BER) (89233218CNA000001 to L.A.N.L., DE-AC05-00OR22725 to O.R.N.L., DEAC05-76RL01830 to P.N.N.L.), and …

… analysis, creation of large metabolite databases by running 1000s of metabolite standards, and development of … untargeted analysis pipelines.  Beyond profiling over 10k samples/year, Dr. Louie and her team work with other JGI … natural products. Proc Natl Acad Sci U S A. 2021;118. doi:10.1073/pnas.2019855118 2. Murphy KM, Edwards J, Louie KB, …

… Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ growth … of the arbuscular mycorrhizal symbiosis. Nature Plants 10, 673–688 Vyshenska et al. 2023. A standardized … to unicellular marine predators.  PNAS 116 (41), 20574-20583 Couradeau, J.S. et al. 2019. Probing the active …

… with an active JGI User Agreement older than January 2024 will be required to execute a 2024 version .  The recent updates were approved by the DOE to … must be in place.  This is in addition to an active 2024 User Agreement or JGI BDLUA. MATERIAL TRANSFER AGREEMENT …

… ( IMG/M ) portal. As part of a comparative analysis, 824 new GEBA-Actino genome sequences were combined with nearly 5,000 publicly available ones and 1,100 metagenome-assembled genomes (MAGs) reconstructed from …

… from around the world. By complete sequencing of 24 new mushroom genomes, and assembling genomes from 60 … FEDER funds) to F.J.R.-D., S.C., and A.T.M., grant PID2019-103901GB-I00 of the Spanish Ministry of Science and … US Department of Energy operated under contract no. DE-AC02-05CH11231. …