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Evolution of a Fungal Gene Expression Regulator
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, and others like … Robert Schmitz at the University of Georgia and including JGI researchers conducted the largest analysis to date of … mechanisms of genome-wide regulation and cataloging them in JGI’s fungal portal MycoCosm. …
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At the Forefront of Terrestrial Virus Research
… Matthew Sullivan. He shared a few thoughts on his summer at JGI through a program that provides graduate thesis research …
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How Microbes Can Protect Plants in Drier Straits
… New Investigator proposal was recently approved through the JGI Community Science Program, to use microbiome science to …
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How Filamentous Fungi Sense Food
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … (Berkeley Lab). The work was enabled in part through JGI’s Community Science Program through a proposal akin to … This first paper integrating multi-omics data from this JGI fungal ENCODE proposal was  recently published in the  …
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From Competition to Cooperation
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the fungal genomes used in the study are available on the JGI fungal portal  MycoCosm . The work builds upon several … with the first mycorrhizal genome sequence generated by the JGI more than a decade ago. Having these datasets will …
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Back in the Lab: the 2023 Summer Intern Experience
… in several years for students and researchers alike at the JGI. With the past few years upended by the pandemic, 2023 …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers nearly tripled the available fungal … and data  are publicly available through MycoCosm , the JGI’s web portal for fungal genome data.   The Impact This … at the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility at Berkeley Lab, …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… Hear more about what they learned from working with their JGI mentors, what challenges they overcame, and what new … school.  The interns from this cohort and their respective JGI mentors are: Ruoxi Zhao and mentor Margot Bezrutczyk … Yumary Vasquez : So this summer what I learned at the JGI is how to really work in the government lab. And I find …
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PhycoCosm Tutorial
… analysis tools developed by the Joint Genome Institute (JGI), a US Department of Energy Office of Science user …
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Toward More Efficient Artificial Photosynthesis
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the Erb lab through the CSP Functional Genomics call, the JGI synthesized library of genes that code for Enoyl-CoA … multi-carbon compounds through a light-driven process. The JGI’s  CSP Functional Genomics call is open year-round, and …
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“A STEM career is in reach and accessible”
… higher education and access to fulfilling science careers, JGI hosted five students from Antioch High School this …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… a DOE Office of Science User Facility. This year, the 12th JGI-UC Merced cohort consisted of three undergraduate … students and eight graduate students, hosted by 18 JGI staff. One of the mentors, postdoc Yumary Vasquez, was … and network with talented scientists and staff at the JGI.” Listed below are the interns, their mentors, and their …
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