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JGI Portals
… The JGI’s data stewardship expertise and infrastructure enable a broad community of scientists and … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality … access to information regarding genome and metagenome sequencing projects, and their associated metadata, around …
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Hiroshi Otani
… Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has … is particularly interested in understanding how, when and why microbes decide to produce which metabolites. … BS, Engineering, Tokyo Institute of Technology Master's, … Kunakom S, Otani H, Udwary DW, Doering DT, Mouncey NJ. …
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Jeremy Schmutz
… Mr. Schmutz’s involvement with the JGI dates back to 1997, when he was … of the Human Genome Project in 2003, he developed sequencing, assembly, and improvement strategies for de novo sequencing of eukaryotic organisms from simple yeasts to … Jeremy Schmutz is the Plant Science Program Head at the JGI. Click to learn more …
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DNA Synthesis Program
… The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, … The DNA Synthesis Program plays a central role in advancing functional … Genome to Enzymes and Pathways focuses on discovering and …
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JGI Interns at UC Merced Earn CAMP Merit Awards
… As part of the ongoing partnership between DOE JGI and UC Merced to promote … 5 UC Merced CAMP students who earned outstanding research awards. From the 99 students who attended, representing 9 UC …
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Overview of the Genomes OnLine Database (GOLD)
… TBK Reddy gives an overview of the JGI's Genomes OnLine Database and why curated metadata matters. …
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Micro-Scale Applications Group
… The Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of … The JGI uniquely offers the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline … that allow us to select specific uncultivated microbes for sequencing based on their level of metabolic activity …
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A Natural Mechanism Can Turbocharge Viral Evolution
… Understanding how a fundamental mechanism of evolution allows … to adapt to changing environments. It also sheds light on why the rapid injection of mutations in a particular gene … all at once from the same environment, called metagenomes. Why? Simon Roux, who led the research team and is the head …
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Accelerating Metagenomics Discoveries with Deep Learning
… On July 6, scientists from Lawrence Berkeley National … learning for metagenomic data.  Metagenomic data, or DNA sequencing data gathered from whole samples rather than … capitalize on these kinds of abilities by applying them to sequencing data. At the workshop, Volkan Sevim, a …
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Nigel Mouncey
… Dr. Mouncey joined the DOE Joint Genome Institute in 2017 as the fourth Director in its … genetics that started with his education and carried forward into his roles as a senior research scientist at Roche … Nigel Mouncey is the Secondary Metabolites Program head as …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… Congratulations to Tanja Woyke, who has been awarded the van Niel … of scholarship in the field of microbiology and is awarded on the recommendation of a panel of experts of the …
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Synthesis
…   The Joint Genome Institute's DNA Synthesis Platform capabilities support researchers … Check out our organism-agnostic CRISPR gRNA design tool  … BOOST provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination and Golden …
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