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Synthetic Biology Lab
… methods for efficient QA/QC based on next-generation sequencing technologies including PacBio and Illumina.  The …
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Inorganic nitrogen availability alters Eucalyptus grandis receptivity to the ectomycorrhizal fungus Pisolithus albus but not symbiotic nitrogen transfer
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A Standardized Synthetic Eucalyptus Transcription Factor and Promoter Panel for Re-engineering Secondary Cell Wall Regulation in Biomass and Bioenergy Crops
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Annotation of the Corymbia terpene synthase gene family shows broad conservation but dynamic evolution of physical clusters relative to Eucalyptus
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Eucalyptus grandis MYB‐Like and RAN‐Like Zinc Finger Proteins Display Dual Roles in Regulating Plant Immunity and Symbiosis Pathways
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Natural Prodcast Episode 17: Cassandra Quave
… things, because a lot of what we do at JGI in terms of the sequencing that we do is very people-disconnected, and … methicillin-resistant Staphylococcus aureus . Can you share why finding treatments for these microbes is so important? … to understand more about plant natural products? We have sequencing facilities, DNA synthesis, metabolomics. Where do …
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Frequently Asked Questions: Proposal Submission
… For accepted proposals, sequencing, synthesis, metabolomics and analysis will be … No, the proposal is only for sequencing, metabolomics and/or synthesis effort at the JGI. … While, in general, requests will be for sequencing and its analysis, investigators are encouraged to …
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New Lineages of Life Group
… environmental samples. This work combines third generation sequencing and machine learning to enable fast, accurate … A read simulation tool for generating synthetic sequencing data from genomic sequences …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… metagenome assemblies. Q&A from the Webinar: Input & sequencing Q(uestion): How much DNA is needed for “regular” … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… and viruses vastly outnumber the microbes. Advances in sequencing technologies and computational tools have … in collecting and submitting their microbiome samples for sequencing at the JGI cannot be overstated. Their … to defend against RNA,” Roux noted, “although it’s unclear why this is so rarely detected.” Developing Approaches for …
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Secondary Metabolites Program
… We have developed Regulon Identification by in vitro-sequencing (RIViT-seq) to identify RNA polymerase-sigma … We are also utilizing DNA-Affinity Purification (DAP) sequencing to express hundreds of transcription factors and …
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JGI Accepts 17 Proposals for Community Science Program
… that produced the reference genome sequence for Eucalyptus grandis. Accessing recently burned soils in …
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