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FICUS
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Single Cell Research Group
… Anomaly” first described by Stanley and Konopa in 1985, which highlights our skewed understanding of microbial … and sequencing of rumen microbiome members from the Hungate1000 Collection.” Nat Biotechnol 36(4): 359-367 (2018). Woyke T ., Doud D. F. R., Schulz F. The trajectory of …
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Complete genome sequence of Eggerthella lenta type strain (VPI 0255T)
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Genome sequence of the phylogenetically isolated spirochete Leptonema illini type strain (3055T)
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Natural Prodcast Episode 22: Alison Narayan
… I always use it as the first word in the title of my talk, 100% fair for you to make that association. DAN UDWARY: So I … But then, imagine though– OK, my group– I brought in like a 10-pound thing of candy corn. I like put it in a candy dish … up and bring in fruit and things like that in between the 10 pounds bags of candy corn. JACKIE WINTER: Do you think we …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… an affiliate scientist at Berkeley Lab. Moreover, follow-up meetings, agreements on exchange of materials and samples as …
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Natural Prodcast Episode 6: Marc Chevrette
… project by watching Amanda Hurley’s presentation from the 2019 JGI Genomics of Energy & Environment Meeting.] He’s also … at over 270 places now worldwide with a rate of around 10,000 students a year. And that was those numbers were … an international ambassador? MARC: Yeah, I believe it was 2012 when she started this at Yale, and she only had six …
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Natural Prodcast Episode 16: Marcy Balunas
… so there are– I hesitate to make a guess but maybe 50 to 100 different strains and they are in individual tubules.  … in the field, these glacial bacteria grow slow and it’s not 100% clear that we know what their biological activities … call this the needle in the Haystack. Because if we have 10,000 features which one do we look at because we are a …
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JGI@25: From Life at the Extremes to Editing Genomes
… has resulted in several papers, including one in 2018 on the discovery of miniature CRISPR-associated proteins … (Banfield’s recounting of that first – and subsequent – meetings is here .) Working with the JGI, Banfield is a … Some Type V CRISPR-Cas Systems Mol Cell. 2020 Aug 6;79(3):416-424.e5. doi: 10.1016/j.molcel.2020.06.022. Wright AV et …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… the microbes in and on humans shape our health. A total of 16 projects have been approved, divided among the following … impacts. The work is supported by NIH Common Fund grant 1U01DE034196-01. The JGI team, including Kyrpides, Camargo, and …
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2024 Progress Report
… 2,475 — had active proposals with us, along with more than 15,000 secondary users who made use of our data. We completed 39,870 projects in FY24 We generated 871 Terabases of sequence We synthesized 9.7 Megabases of DNA We processed 13,700 metabolomics samples With our users, 247 publications …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… resulted from a three-way collaboration that began in 2019, recalled Uri Neri of Tel Aviv University, one of the … also working on RNA virus mining. After a couple of virtual meetings of the three teams it was clear that a larger …
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