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Natural Prodcast Episode 18: A CSP Primer
… the user programs at the JGI, and I’m also the head of the microbial genome program. And I’m a scientist here. And have … We don’t want to get a proposal that’s just asking for 20 microbial genomes. That is not a good fit for our annual CSP … in a way that helps the PI, I think. For metagenomes and microbial genomes, in part because of the scale of how much …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of microorganisms live among … with their host indefinitely. Now, in studying a microbial mat from Cone Pool in Mono County, California, …
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User Advisory Committees
… on the effective management and strategic objectives of the microbial and metagenome programs. The committee serves as …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… first sampled the area in summer 2016.  She described the microbial diversity patterns of Puerto Nuevo’s coastal … and Higher Education at Ensenada (CICESE) in her first microbial ecology paper in the journal PLoS One . “Puerto … a fishing town and we know little about its coastal microbial ecology. We also know little about where to …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… of the IMG data portal , which is a larger portal for microbial genomics. IMG stands for Integrated Microbial Genomics. It’s one of the big data portals here at … that you can get from it, right?  And so these are, then, microbial genomes that we were able to assemble from that …
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Digging into Microbial Ecosystems Deep Underground
… at Colorado State University have many questions about the microbial communities deep underground, and before the …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… UGA-Langebio in Irapuato, Mexico. His interests are in microbial diversity and evolution, particularly as how …
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Natural Prodcast Episode 6: Marc Chevrette
… Canada. I just got back from a conference in Canada on antimicrobial resistance sponsored by the Garner foundation. And … so I’m you know, I’m a little bit familiar coming from a microbial ecology background myself, but not to this degree. … is where I’m going.  So specifically to the fields of microbial ecology and community dynamics and understanding …
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Natural Prodcast Episode 16: Marcy Balunas
… tell us about this squid-microbe relationship. Or is it a microbial community with microbial community relationship?  MARCY: Yes. So I would … of these. And so Spencer and his group have done the microbial profiling for what’s in there. It’s a fairly well …
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Natural Prodcast Episode 1: The Primer, Part 1
… right. So I did a PhD in microbiology at MIT, and I studied microbial ecology. I studied Vibrio species in the ocean, so … We’re looking at a schematic of different pathways in a microbial cell, it looks like. It could be a eukaryotic … I’m looking at it with, you know, it’s within a species or microbial population, you have some set of shared traits …
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Natural Prodcast Episode 7: Ben Shen
… genomic revolution, to me, as a natural part chemist for microbial natural product, is that I love microbial natural products is because one of the traditional … it takes years to regrow the trees back. And the beauty for microbial natural products is the microorganism, and you can …
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Marine Microbe Contains Multitudes
… A deep dive into microbial genomics reveals one bacterial species is made of … Time-series (HOT), they collected samples of the ocean’s microbial communities periodically at different depths. In … software suite, BBTools , and relying on the JGI Integrated Microbial Genomes & Microbiomes (IMG/M) system . By …
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