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Busting the Unbreakable Lignin
… Research Center. O’Malley is also affiliated with JBEI. The JGI data portals and pipelines helped identify potential genes … . The study’s pivotal NMR (nuclear magnetic resonance) data, gathered using magnetic fields to diagnose electronic …
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When “The Blob” Made It Hotter Under the Water
… Data from marine heatwave event may foreshadow climate … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … in marine microbial communities. Using the JGI-generated data, Sachia Traving, a former postdoctoral fellow in the …
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High-Quality Draft Nuclear and Mitochondrial Genome Sequence of Fusarium oxysporum f. sp. albedinis strain 9, the Causal Agent of Bayoud Disease on Date Palm.
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The Power of One, Amplified
… of microbial genomes directly from environmental sequence data, by piecing each genome together from large mixtures of … was identified from microbial and metagenome sequence data sets generated from a handful of hot springs, including … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Complete Genome of Serratia sp. Strain FGI 94, a Strain Associated with Leaf-Cutter Ant Fungus Gardens
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Complete Genome of Enterobacteriaceae Bacterium Strain FGI 57, a Strain Associated with Leaf-Cutter Ant Fungus Gardens
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MGM Workshop at Fisabio Summer School 2026
… by Rekha Seshadri and Mateus Fiamenghi from the Microbiome Data Science group. …
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A Complex Confection Decoded: Sugarcane Reference Genome
… The Impact In providing a reference sugarcane  genome , the JGI provides foundational genetic information that crop … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … The reference genome of R570 is available on the JGI plant data portal,  Phytozome .   …
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How Filamentous Fungi Sense Food
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … (Berkeley Lab). The work was enabled in part through JGI’s Community Science Program through a proposal akin to … genes. This first paper integrating multi-omics data from this JGI fungal ENCODE proposal was  recently …
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iPHoP: A Matchmaker for Phages and their Hosts
… used 1,870 known virus-host pairs to generate a matrix of data points.  Applied to 216,015 high-quality virus sequences in the IMG/VR database, the iPHoP program generated many new … reflecting factors such as the quality and number of datasets for human microbiome data. In other environments, …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … identified. The JGI researchers surveyed publicly available data in the JGI’s  IMG/M database , information the Probst lab used to search for and …
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A Natural Mechanism Can Turbocharge Viral Evolution
… the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility located at … has looked for DGRs in a broad range of publicly available datasets. They’ve discovered that DGRs are not only … Communications article , the team used publicly available data, approximately half of which was generated by the JGI, …
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