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Help from Citrus’ Bitter, Hardier Cousin
… The chromosome-scale genome sequence of trifoliate orange yields clues to … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … UF/IFAS professor of citrus breeding genetics and longtime JGI collaborator, are senior authors of the  recent study …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Natalia Ivanova, senior author of the study and head of the JGI’s Microbiome Annotation Group. Many of these bacterial and archaeal genome sequences have been generated using techniques that the JGI …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the … aquatic to terrestrial habitats. The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide … the zoospores were then sent to the JGI for whole genome sequencing using the Illumina platform. Unfortunately, both …
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Supporting Global Research into Actinomycetes
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, as well as a … Secondary Metabolites research group . That group, led by JGI Director Nigel Mouncey, has launched its  Secondary … ( Hear ActinoBase’s site editor  Kate Duncan in the JGI Natural Prodcast podcast , where she talks about this …
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Building Wet and Dry Lab Skills
… on to Dori – a computer cluster owned and operated by the JGI and Berkeley Lab – to launch a jupyter notebook running … Alabama A&M majoring in Biology, and I'm also an intern at JGI with Yi and Sharon. Yi Zhai : Hi, everyone. My name is … how to run Dori, which is a compute cluster owned by JGI, and used Jupyter notebook for a programming environment …
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
… On July 30, UC Merced students and their JGI mentors toasted to the end of a nine-week virtual … by short final presentations attended by more than 75 JGI staff. According to Axel Visel and Zhong Wang, founders … and graduate students from UC Merced with at least one JGI mentor. Together, they work through a specific project …
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Green Algae Reveal One mRNA Encodes Many Proteins
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … (FICUS) collaborative science initiative between the JGI and EMSL.  … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Promoting the Power of Viral Metagenomics
… summarizing the field of viral metagenomics, authored by JGI researchers Lee Call,  Stephen Nayfach and  Nikos … piece was written by Call, a postdoctoral fellow in the JGI Microbiome Data Science Group led by Kyrpides. Since … Currently one of the best ways to study such viruses is by sequencing the bulk DNA or RNA contained in a sample that …
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Igor Grigoriev
… Dr. Grigoriev joined the JGI in 2003, following his postdoctoral training at UC … joint appointments as Fungal and Algal Program Head at the JGI, a Senior Scientist at Lawrence Berkeley National … genomes, from protists to plants. In 2009, he launched the JGI Fungal Genomics program which resulted in over 2500 …
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Ben Bowen
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… JGI-led team significantly expands the global diversity of … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … genomes of uncultivated giant viruses from environmental sequences across the globe, then using these sequences to …
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Picking Up Threads of Cotton Genomics
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Berkeley National Laboratory (Berkeley Lab) has now sequenced and assembled the genomes of these five cotton … Nature Genetics include Jane Grimwood and Jeremy Schmutz of JGI’s  Plant Program , both faculty investigators at the …
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