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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
… Tringe, a microbiologist, was recognized for “advances in sequence-based studies of microbial assemblies, revealing … Environmental Genomics and Systems Biology Division, and JGI’s deputy for user programs. She also leads the JGI’s Microbial Systems group. The award ceremony was held …
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A One-Stop Shop for Analyzing Algal Genomes
… algal genomes can be incredibly complex and difficult to sequence and understand. A team of researchers led by Algal … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Acids Research journal. The genome portal reinforces the JGI’s new strategic focus on exploring algal biology, …
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Yasuo Yoshikuni
… has supported over 250 projects since it started. At the JGI, Dr. Yoshikuni also manages the Synthetic Biology … for building composite materials. Before joining the JGI, Dr. Yoshikuni was co-founder and chief science officer … Yoshikuni is the DNA Synthesis Science Program Head at the JGI. Click to learn more about the program's areas of focus, …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … genomic capabilities. Summary In a project supported by the JGI Community Science Program, University of California (UC) … Part of the work was done through a summer project in the JGI-UC Merced Internship Program. In 2023, Shayna Bennett, a …
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Forming Scientific Connections and Building Community
… The 11th cohort of JGI-UC Merced interns pick highlights from their summer … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, hosted three … Nandita Nath & W. Berkeley Kauffman Project: “ 16s Sequencing of Barcoded Microbial Genomes ” Morgan Lavenstein …
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Gut Fungi: Unexpected Source of Novel Chemicals
… finnis . In work reported in 2017, the fungal genomes were sequenced by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … National Laboratory. The team’s research at both the JGI and EMSL was enabled by the Facilities Integrating …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… Session and Rokhsar, building on work with former JGI postdoc Jarrod Chapman, developed a method to correctly … and the  oilseed crop false flax – genomes that have been sequenced by the JGI – and the common strawberry, which is octoploid (eight …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… usually employ two different methods; shotgun metagenomic sequencing and single-cell sequencing. For years, extracting … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … their analysis goals. Offering this tool establishes the JGI as a leader in single-cell genomic amplification at a …
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Learning to Look
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, developed an … viruses,” said the study’s lead author Simon Roux, a JGI research scientist in the  Environmental Genomics group … first worked on a reference dataset that included genome sequences known to be affiliated with the Inoviridae. “What …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… a DOE Office of Science User Facility. This year, the 12th JGI-UC Merced cohort consisted of three undergraduate … students and eight graduate students, hosted by 18 JGI staff. One of the mentors, postdoc Yumary Vasquez, was … and Identification of Mitochondrial Plasmids from DNA Sequence Moitrish Majumdar Mentors: Bikash Shrestha, Crysten …
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Understanding Wildfire Recovery, Starting in Soil
… a step further, using both DNA and messenger RNA (mRNA) sequencing to identify those traits that have helped fungi, … and growth.  This study builds on the pyrophilous fungi the JGI has previously sequenced , and provides a powerful … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI). EMSL and the JGI are DOE Office of Science User …
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Improved High-Quality Draft Genome Sequence of the Eurypsychrophile Rhodotorula sp. JG1b, Isolated from Permafrost in the Hyperarid Upper-Elevation McMurdo Dry Valleys, Antarctica
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