Search

… improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led a team that  recently … to link experimental evidence across species. Centralized databases with large-scale transcriptome projects such as … is an updateable resource. To demonstrate that, we included datasets from two species, one of which is sweet sorghum Rio …

… the User Support Analysis team to analyze plant microbiome data via programming languages like Python. The more … plants and extracting DNA. They also analyzed 16s amplicon data to determine microbiome composition. This gave them an … on to Dori – a computer cluster owned and operated by the JGI and Berkeley Lab – to launch a jupyter notebook running …

… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 … nonpolar metabolite analysis, creation of large metabolite databases by running 1000s of metabolite standards, and … custom software for integrating metabolomics with genomic data (MAGI) for functional annotation and identifying …

… genome recovery from metagenomes. The Science Through the JGI’s Emerging Technologies Opportunity Program (ETOP) , … to high (596 genomes) complexity. The environmental datasets included metagenomic data from Crystal Geyser in Utah (work also done by the …

… New Graduate Internship Program Builds Bridges Between DOE JGI, UC Merced Days after presenting the results of his … says. “Many academic labs don’t know how to analyze RNA-Seq data very well, sending it out to companies. I’ll take that … of the opportunity. “I’m getting a picture of the amount of data that’s going to be generated at academic level in a few …

… interactive collection of sequenced algal genomes, omics data and comparative analysis tools developed by the Joint Genome Institute (JGI), a US Department of Energy Office of Science user …

… One Health Ruhr (OHR), and the DOE Joint Genome Institute (JGI), Molecular Biophysics and Integrated Bioimaging (MBIB) … user facilities at Berkeley Lab. Commenting on the visit, JGI Director Nigel Mouncey expressed enthusiasm about the … biology, single cell and systems biology, omics, and big data science, machine learning for experimental science, …

… In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These … write reports, and publish first-author papers, making the data available for future research. Hear from Rekha Seshadri (JGI) and Matt Escobar (California State San Marcos) about …

… All participants and staff of JGI events are required to adhere to the following Code of …

… you for joining us at the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of Energy & Environment Meeting! The JGI convenes this annual gathering of leaders from diverse … infrastructure – DNA sequencing, synthesis, metabolomics, data analysis, and new technology developments – that the …

… eukaryotic microbes and viruses in environmental sequence data. Dr. Schulz employs multi-omics (metagenomics, … and biogeochemical cycles. He provides his expertise to the JGI user community and supports various user projects in the …