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Dealing with Drought: Uncovering Sorghum’s Secrets
… to determine what genes respond to drought conditions, and how these conditions impact the crop and its microbiome. For three consecutive years (2016-2018), researchers conducted large-scale experiments in … the sequencing datasets. The results from the first year showed that 10,727 genes or 44% of expressed genes respond to …
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UC Merced Interns Reflect on Their JGI Summer Projects
… JGI also hosted events to enable students to showcase their work and even a celebratory toast at the end …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… will serve the JGI and KBase for years to come.” A slideshow depicting 15-years of photo memories of Ray’s tenure, … tenure, Ray said that he was pleasantly surprised to see how well the management skills he had learned during his …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… in species with large and complex genomes,” said Lovell. “However, new sequencing technologies have allowed us to … trying to leverage these discoveries to better understand how plants tolerate stresses and challenges in the natural …
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Tracking the Origins of Methane-Producing Microbes
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Axel Visel
… Dr. Visel also served as JGI Interim Director from March 2016 – March 2017.   … Achievement 2009 LBNL Outstanding Performance Award 2006 AHA Lievre Fellowship Award, 2000 Boehringer Ingelheim … pathogenic rewiring of gene-enhancer interactions. Cell 161, 1012-25 Ivanova NN, Schwientek P, Tripp HJ, Rinke C, …
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Gene Expression: From On-Off Switch to Dial
… were previously missed in knock-out screens. These results show that this singular library synthesized by JGI was … Foundation, and the JGI Synthesis Program under FP00005685. In addition, M.D. acknowledges funding from a National …
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JGI Announces 2026 New Investigator Portfolio
… a list of researchers whose proposals were accepted for 2026. With the JGI's resources, these researchers will harness … the next deadline for proposal submission is Sept. 8, 2026, for inclusion in the October 2026 review. You can also find more information about the …
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Improving the Cacao Genome and Phytozome
… (ICCO), global cocoa bean production in 2017-2018  was 4.6 million metric tons . The global chocolate brands couldn’t … and includes RNA-seq data. The improved  T. cacao Matina 1-6 genome is now available for comparative purposes on the …
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You Can Move, But You Can’t Hide
… to L.A.N.L., DE-AC05-00OR22725 to O.R.N.L., DEAC05-76RL01830 to P.N.N.L.), and used computational resources from … (LBNL), 89233218CNA000001 (LANL), and DE-AC05-76RL01830 (PNNL). …
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A Shrubbier Version of Rubber
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Jeremy Schmutz
… co-led the team that finished the DOE human chromosomes 5, 16, and 19. Following the completion of the Human Genome … complex polyploid genome architecture of sugarcane. Nature 628, 804–810. Sreedasyam, A., Plott, C., MdS Hossain, J. T., … analysis of dual domestications. Nature Genetics 46: 707-713. Paterson, AH et al. 2012. Repeated …
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