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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… on enzymes that have been evolving for billions of years. However, these enzymes are often loosely understood, leaving … (ATs). These enzymes play a crucial role in how an organism processes both carbon and nitrogen. This … computational and experimental approaches to look at how this enzyme family evolved across 90 species. “One …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… we also hoped to use this unique opportunity to quantify how transitions to higher ploidy could be generating these … also hoped that this would more broadly allow us to assess how ploidy variation alters genomic diversity, fitness, and … in 4X switchgrass is also observed across the 8X cytotype. However, the 4X and 8X cytotypes diverge in their response …
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Complete Genome Sequence of Paenibacillus strain Y4.12MC10, a Novel Paenibacillus lautus strain Isolated from Obsidian Hot Spring in Yellowstone National Park
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Filling in the Plant Tree of Life
… What if we understood plants and how they adapt to their ever-changing environments better? …
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IMG/VR
… assembled from metagenomes. He also demonstrates briefly how to leverage novel capabilities of IMG/VR to browse and …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … whose complex genomes are helping breeders understand how they can boost crop productivity and develop additional … end products. JGI-enabled research is also informing how these grasses have adapted to a range of climates and …
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JGI User Executive Committee Expands
… in understanding which processes change biodiversity, and how these changes affect the dynamics and functioning of … tools that can help with dataset analysis, as well as how they can be shared with and used by students. Solomon  … at the University of Delaware. His lab is interested in how microbial communities can efficiently degrade complex …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… long-term open access ecological data to better understand how U.S. ecosystems are changing.  Through the  “Facilities … the FICUS program at:  jgi.doe.gov/user-programs . Q:  How can I get that NEON Biorepository Letter of Support … that data. NEON recommends you host your data elsewhere. However, the  NEON Biorepository data portal can host many …
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Emiley Eloe-Fadrosh
… Collaborative (NMDC). Prospective users with questions on how to partner with the Metagenome Science Program on their … Education …
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Virus-Microbe Interactions of Mud Island Mangroves
… project, I wanted to incorporate that CSP, but also look at how viruses might be influencing the methane cycling within … wetlands.” A chapter of Rambo’s research focuses on how viruses influence carbon cycling in coastal mangroves. …
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The Soil Blooms Green
… Mary Ann Bruns and Terry Bell are digging in to understand how. …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… A(nswer): Possibly, it would depend on the sample. However, we don’t do this because they typically contain … you give us an idea about the scale of an average study? How many samples are typically involved? How long does it … Biol. 2019 Apr 19;14(4):704-714. doi: 10.1021/acschembio.8b01107. Epub 2019 Apr 4. Q:  Any advice on normalizing …
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