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Uncovering Novel Genomes from Earth’s Microbiomes
… a wide range of research fields. A public repository of 52,515 microbial draft genomes generated from environmental … Using this massive dataset, Nayfach clustered the MAGs into 18,000 candidate species groups, 70% of which were novel … BGCs in  IMG/ABC (Atlas of Biosynthetic Gene Clusters) by 31%. ( Listen to this JGI Natural Prodcast episode on genome …
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… some of the brightest minds in genetics as part of our  2022 Annual Meeting . The meeting was a hybrid event, with … had a powerful tool,” Doudna said during her keynote. In 2012, Doudna published results indicating how CRISPR Cas-9 … During her keynote speech to JGI staff and users at our 2022 Annual Meeting, Wessler discussed the revolutionary work …
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Expanding Virophage Diversity
… the number of known high quality virophage genome sequences 10-fold through computational approaches. By mining more than 14,000 publicly available metagenomic datasets in JGI’s  … virophage marker gene MCP, they were able to identify 44,221 total virophage partial sequences, including over 28,000 …
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JGI Hosts GPU Hackathon in May
… WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing … organizing nearly a dozen hackathons around the world in 2019, only the JGI hackathon is particularly focused on … maximum of six teams will be hosted at the Hackathon, with 1-2 mentors per team. Participants will be expected to have …
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… Tingting Xiang and Sheree Yao. ] ] The JGI welcomed 14 scientists selected for our 2026 Community Science …
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A Collaboration to Improve Plant Genome Annotations Across Species
… Gene Atlas in  Nucleic Acids Research . The project spans 15 years and involves more than 17 research groups. The team set out to characterize the … targets for plant improvement. Surprisingly, about 16 to 56 percent of plant genes are poorly characterized, …
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Supporting Global Research into Actinomycetes
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Calculating the Costs of Multiple Switchgrass Gene Copies
… (in this case, a plant’s complete genetic makeup) and 10 common gardens. We discovered that 8X populations have …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… page of that book. Published online September 28, 2022, in Cell , a team led by researchers at Tel Aviv … resulted from a three-way collaboration that began in 2019, recalled Uri Neri of Tel Aviv University, one of the …
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A More Intuitive Phytozome Interface
… version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  version 13 will become the current, and only, version of Phytozome …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… For the last 15 years, Ray Turner has been one constant for the Joint Genome Institute. On July 1, 2020, that all changed. Ray’s vigilant stewardship as … Deputy post by  Nick Everson , the person Ray hired in 2007 to serve as JGI’s Business Manager. In 2012, Nick jumped …
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Evolution of a Fungal Gene Expression Regulator
… least one reference genome for every family of fungi, the 1000 Fungal Genomes initiative of the U.S. Department of … the US Department of Energy under contract no. DE-AC02-05CH11231. The Georgia Advanced Computing Resource Center (GACRC) …
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