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JGI announces 2024 Functional Genomics awardees
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Enlarging Windows into Understanding Gene Functions
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You Can Move, But You Can’t Hide
… Plasmid Resource (IMG/PR) , which currently has more than 700,000 plasmids from genomes, metagenomes and … of Biological and Environmental Research (BER) (89233218CNA000001 to L.A.N.L., DE-AC05-00OR22725 to O.R.N.L., DEAC05-76RL01830 to P.N.N.L.), and used computational resources from …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… (DE-AC02-05CH11231 to J.F.B.). The work ( proposal doi: 10.46936/10.25585/60000800 ) conducted by the U.S. Department of …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… type of food that was in the contaminated aquifer in 2007 to achieve this goal. In less than four years, parts of … collected microbial samples from wells at the site in 2007, 2009, and 2010. DNA was extracted from the samples that were … The work (proposal:  10.46936/10.25585/60000717 ) conducted by the U.S. Department of …
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Building Wet and Dry Lab Skills
… the plants and extracting DNA. They also analyzed 16s amplicon data to determine microbiome composition. This … seeds. We also use CRISPR-Cas9. And right now we have over 300 plants that we’re trying to figure out the biome of. …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… as carbon sources. Summary Sphagnum, a genus of just under 400 mosses that can carry up to 25 times their dry weight in … The work (proposal no. 10.46936/10.25585/60001030) (A.J.S.) conducted by the US Department of Energy …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… The only requirements are that you stay under the 500-gigabase cap and that you don’t request outside of the … small proposal that might not max out the whole 500 gigabases? Is it better to try to reach that maximum with …
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A Natural Mechanism Can Turbocharge Viral Evolution
… organism’s fitness. Moreover, the discovery of more than 30,000 DGRs in this analysis, a 20-fold increase over what was … Science Foundation’s XSEDE computing resource (award DEB170007), and through a Challenge Grant from the California … Office of Biological and Environmental Research (DE-SC0004632, DE-SC0010580, DE-SC0016440), and acknowledge the …
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The JGI announces 2024 awardees for our Community Science Program annual call
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UC Merced Interns Reflect on Their JGI Summer Projects
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… require this kind of lab culture. Beginning in the early 2000s , these environmental metagenomes began to offer a … to boost understanding of environmental viruses. In 2016, Nikos Kyrpides at the JGI led a team that combed datasets … world, including 3,908 isolate reference DNA viruses and 264,413 computationally identified viral contigs. Since …
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