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You Can Move, But You Can’t Hide
… the JGI’s  IMG Virus Resource (IMG/VR) , now with more than 15 million viral genomes. It was also key to developing the … of Energy Joint Genome Institute (https://ror.org/04xm1d337), and the National Energy Research Scientific Computing Center (NERSC) (https://ror.org/05v3mvq14), are DOE Office of Science User Facilities operated …
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JGI User Executive Committee Expands
… on dead wood decomposition. She’s also participated in the 1000 Fungal Genomes Project and has an interest in … user program participation from researchers at non-R1 institutions, now defined as those that don’t spend …
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Ian Blaby
… Since 2019 Dr. Blaby heads the DNA synthesis platform at the Joint … to carbon metabolism in cyanobacteria Nature Communications 15(1) 3167. 2024 Simirenko et al ., gRNA-SeqRET: a universal …
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Boosting Small Molecule Production in Super “Soup”
… keep processes running smoothly. As reported August 26, 2021, in Nature Communications , researchers led by Hal Alper … Genomics of Energy & Environment Meeting on September 1, 2021. Register here to hear him and others.   Byline: Massie S. …
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Tracing the Evolution of Shiitake Mushrooms
… atmospheric carbon dioxide.  Summary Researchers sequenced 11 samples from Asia–Australasia and 13 samples from the Americas to trace the evolution … This research was supported by the NSF awards DEB- 1456588 to D.H. and DEB-1442113 to A.R., the Department of …
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Training the Next Generation of Talent
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Boosting Small Molecule Production in Super “Soup”
… keep processes running smoothly. As  reported August 26, 2021, in  Nature Communications , researchers led by Hal Alper … Genomics of Energy & Environment Meeting on September 1, 2021.  Register here to hear him and others.     …
Learn more
Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his doctoral research in synthetic biology and … in flowering plant gene regulation." Nature Plants 11, no. 8 (2025): 1514-1527. Lax, Carlos, Stephen J. Mondo, …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between … Berkeley National Laboratory (Berkeley Lab) sequenced 1 trillion bases — a terabase — of soil RNA for this … Science Program proposal that Martin submitted in 2012. At that time, the field had surveyed many different soil …
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Axel Visel
… Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the … methods for elucidating the gene regulatory landscape of vertebrate genomes, which led to the discovery of … Dr. Visel also served as JGI Interim Director from March 2016 – March 2017.   …
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Igor Grigoriev
… over 2500 fungal genomes in the JGI MycoCosm portal. In 2018, he launched scale-up of algal geomics and PhycoCosm … by anaerobic fungi.  Nature Microbiol. 8(4):596-610. Nelson et al (2022) Wildfire-dependent changes in soil … microbiome diversity and function.  Nature Microbiol. 7(9):1419-1430. Ye et al (2022) The role of zinc in the adaptive …
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