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Three pairs of fungal Trametes strains isolated from distinct geographic origins show conserved genomic features and adaptive response to plant biomass
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SIPs with Standards
… for studying microbial communities. These experiments can show which microbes are handling specific nutrients, or what they're doing with those nutrients, and even how quickly. But there's a catch: SIP labwork and analysis …
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VEGA Symposium
… rates available now General & Berkeley Lab Attendee – $250 Student – $200 Regular Rates (begin September 19, 2026) … & Berkeley Lab Attendee – $300 Students & Postdocs – $250   Hosted by the DOE Joint Genome Institute, the 5th Viral … a “Viral Ecogenomics” community to foster discussion on how to best capture and characterize uncultivated viral …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… machine learning tools. “This was very exciting to see how Rhondene not only embraced the research question and … perspective about what it means to be a scientist. “To see how team science is done at an advanced and large research … left a mark on me,” she said. In addition to learning about how to navigate and analyze large genomic datasets during …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… being used and cycled in different environments. It also shows how environmental conditions may affect metabolic activity … markers across different ecosystems to better understand how nutrients are used and cycled. Additionally, it can show … Department of Energy operated under Contract No. DE-AC02-05CH11231. This research used resources of the National …
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An Addiction Crucial to a Fungus’ Reproduction
… its reproductive machinery The Science To better understand how beneficial organisms (symbionts) are transmitted between … Office of Science User Facility was conducted to understand how the antagonistic-to-mutualistic transition occurs. … DOE JGI team sequenced and annotated a host genome (Rm ATCC 52813) as part of the 1000 Fungal Genomes project. As …
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New Research Sheds Light on Diversity in the Deep Sea
… ecosystems. This means they hold clues for understanding how life thrives in extreme environments. They also produce … the ocean through vents at temperatures that can exceed 750 degrees Fahrenheit. The minerals in these fluids include … 40 samples from five oceanic regions to better understand how these hydrothermal ecosystems function in such extreme …
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Viruses Reprogram Cells into Different Virocells
… State University and the University of Michigan studying how virus infections cause significant metabolic changes in … microbial cells that are transformed into virocells, and how the outcomes of these infections can affect the … , which appeared in  The ISME Journal , they focused on how virus-infected microbes are transformed into virocells …
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Fungus Fuels Tree Growth
… Researchers start pinning down how a fungal symbiont spurs growth of poplar, a potential … U.S. Department of Energy (DOE). By better understanding how poplar responds to its intimate associations with … Innovation (CBI) at Oak Ridge National Laboratory. To see how the fungus affected poplar growth, the team compared …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… above. Described as a “river of grass” that stretches some 580,000 square miles across southern Florida, they encompass … teaches the A-Level Advanced International Certificate of Education (AICE) Biology class at Boca Raton Community High …
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Hiroshi Otani
… He is particularly interested in understanding how, when and why microbes decide to produce which … H, Udwary DW, Doering DT, Mouncey NJ. Cytochromes P450 involved in bacterial RiPP biosyntheses. J Ind Microbiol Biotechnol. 2023 Feb 17;50(1):kuad005. Otani H, Udwary DW, Mouncey NJ. Comparative …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… scientist Simon Roux , who was recently selected as the 2025 recipient of the Microbiome Data Prize by the American … networking opportunities and fosters discussions on how to capture and characterize viral diversity, understand … and large-scale data analysis to better characterize how viruses infect soil microbes and influence how soil …
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