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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… This webinar focused on how the JGI employs single-molecule, … long-reads have been applied to DNA methylation analysis as well as improving metagenome assemblies. Q&A from the … PacBio typically requires ~ 1.5-10 ㎍. Low-input protocols are continuously improved, but currently require input in …
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Massie S. Ballon
… stories and outreach efforts, the team aims to broaden awareness of and access to JGI public resources and the DOE mission, as well as help cultivate the next generation of genomic … and writing feature profiles. She is one of the Biosciences Area representatives to Berkeley Lab’s Stewardship Community …
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JGI Welcomes New UEC Members
… and their access to technical capabilities JGI offers, as well as proposal review procedures and the organization of the JGI Annual Meeting. Any investigator who has been an active user of the JGI at any time in the … a breadth of institutions, research topics and career stages. The election period concluded on October 21. …
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Doubling Down on Known Protein Families
… across multiple other research centers around the world. “We’ve more than doubled the number of protein families known … living everywhere from soils and stomachs to the deep sea are capable of doing a lot of unique things when it comes to … and the functions they perform, artificially replicating a whole community is impossible.  Metagenomic sequencing …
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Metabolomics Technology Group
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2025 Progress Report
… in studies of complex biological and environmental systems. We optimize our service to the community through responsibly …
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Function-driven single-cell genomics uncovers cellulose-degrading bacteria from the rare biosphere
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Accurate, multi-kb reads resolve complex populations and detect rare microorganisms
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Long-Term Transcriptional Activity at Zero Growth of a Cosmopolitan Rare Biosphere Member
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… a proposal to the DNA Synthesis CSP call , and the results are described in ACS Chemical Biology. Using fluorescent … signal changes, but their signal intensity is low due to weak reconstitution of luciferase activity. In contrast, … as candidate biosensors. These 92 homologues were synthesized as codon optimized sequences and cloned …
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A Sorghum Pangenome Opens More Doors to Discovery
… researchers to harness the traits that let this biomass powerhouse thrive. Within its genome, Sorghum bicolor holds … into drought tolerance, biomass production and more — however, a single reference genome shows only one slice of the … 2009. In the United States, BTx623 is often used as a parent plant to develop commercial hybrids for grain and …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… pulling over to the side of the road to collect small weedy plants and bring them back to the lab. The weedy grass … thrive in warm, arid environments. Corn and sugarcane are among the major high-yield C4 crops, as are the … from falling,” said JGI Plant Program head Jeremy Schmutz , who is also a HudsonAlpha Faculty Investigator. “This could …
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