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Secondary Metabolites Advisory Committee
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Cataloging the Microbes that Manage the Health of River Systems
… monitor for and identify land use or water quality changes. Summary Rivers are key components of watershed ecosystems, … systems, these communities remain understudied. Through the JGI’s Community Science Program, Colorado State University … program at Pacific Northwest National Laboratory. The JGI sequenced over 1,000 metagenomes and established …
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Making a Lichen Together
… better model global carbon and nitrogen cycling. Summary To shed light on lichen, an international team led … nitrocellulose filters in Petri dishes. The scientists also sequenced the fungus and photobiont’s genomes and compared … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility. Grigoriev and …
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Tracing the Evolution of Shiitake Mushrooms
… at Lentinula samples from around the world. By complete sequencing of 24 new mushroom genomes, and assembling … structures, as well as atmospheric carbon dioxide.  Summary Researchers sequenced 11 samples from … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Natural Prodcast Episode 23: Aaron Puri
… natural products chemistry, and he has a project with the JGI to synthesize the genes for and explore the chemistry of … episode , you’ve heard a little about these, and Aaron and JGI are working together to try to understand the enzymology … of their synthases so that we can start to use the DNA sequence to predict or just understand better the language …
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DNA Synthesis Science User Advisory Committee
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Natural Prodcast Episode 19: Bill Fenical
… things I want to make sure that we talk about. You have a JGI project going with us that we want to talk a little bit … So fortunately, the secondary metabolite component of the JGI, people are interested in this area. DAN UDWARY: I know … forward to seeing the data when it finally gets off the sequencers. The pandemic has obviously slowed JGI down a …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … in  this episode of to the JGI podcast Genome Insider . ) Summary A recent paper published in Nature Communications on … richardii marks the first published manuscript of a genome sequence generated through the OGG. For a long time, C-fern …
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Natural Prodcast Episode 20: Brian Bachmann
… which was a very early genome mining company, back when DNA sequencing of natural product pathways was hard and … you can always find at naturalprodcast.com or through the JGI website at jgi.doe.gov . There’s a lot more to talk about there, and …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… usually employ two different methods; shotgun metagenomic sequencing and single-cell sequencing. For years, extracting … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … in single-cell genomic amplification at a large scale. Summary The two most common methods for collecting genomes …
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Nigel Mouncey
… and today, focuses on continuing to build and position JGI as a leading integrative genome science user facility.  In addition to serving as JGI Director, Dr. Mouncey leads his own science group at JGI focused on secondary metabolites. He is also on the … is the Secondary Metabolites Program head as well as our JGI Director. Click to learn more about the program's areas …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… use as biomass or in biomass conversion to biofuel. Summary Water temperatures and salinity determine how life … This was facilitated in part by RNA library preparation and sequencing from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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