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High-quality draft genome sequence of Flavobacterium suncheonense GH29-5T (DSM 17707T) isolated from greenhouse soil in South Korea, and emended description of Flavobacterium suncheonense GH29-5T
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… Merced. What started with 2 interns in the summer of 2014 has grown to a total of 75 with the inclusion of the 2023 … Lawrence , the first graduate student intern from the 2014 cohort. After working on his post-doctoral position with … helped her in her role at the Lab as well.  One of the 2015 program alumnus Cristhian Gutierrez discussed how his …
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Four Researchers Join JGI User Executive Committee
… Köpke of Lanzatech are the latest additions to the now 14-member committee. Go here to view the current UEC roster. …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… found it is missing 33 genes thought essential for photosynthesis, yet still thrives. The Impact This discovery … for biorecovery of critical minerals. Due to its ability to photosynthesize, it can function as a self-sufficient … is remarkably simple with only 7,500 genes, compared to 17,000 in the model alga Chlamydomonas . The genome is also …
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Draft Genome Sequence of Frankia sp. Strain DC12, an Atypical, Noninfective, Ineffective Isolate from Datisca cannabina
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Soil virus offers insight into maintaining microorganisms
… three domains of life.  Using the IMG suite, JGI retrieved 142 of the GH75 AMGs, which encode enzymes that break down … work was performed on a project award ( https://doi.org/10.46936/cpcy.proj.2021.60161/60000437 ) under the FICUS program to JEM and used …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… Andrew Lin and mentor Vy Duong, Understanding Key Genes in Photosynthesis Ravikiran Madichetty and mentors TBK Reddy … and we’re working together on predicting the level of photosynthesis in a model green alga called Chlamydomonas … and the fact that I got to do a project involving over 12,000 fungal genomes was just really, really exciting for …
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Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended
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Hiroshi Otani
… Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in … RiPP biosyntheses. J Ind Microbiol Biotechnol. 2023 Feb 17;50(1):kuad005. Otani H, Udwary DW, Mouncey NJ. Comparative and …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… the crop and its microbiome. For three consecutive years (2016-2018), researchers conducted large-scale experiments in the … Some different responses relate to functioning of the photosynthetic machinery, which requires water to function. … This research was funded in part by DOE Grant DE-SC0014081 (to N.V., B.C., C.G., G.P., M.M., J.H., J.S., Y.Y., …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… On February 17, 2021, JGI and the Environmental Molecular Sciences Laboratory … Science” (FICUS) program. Letters of Intent are due March 17, 2021. Q&A from the Webinar: Q(uestion): Who can apply …
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Mapping Heat Resistance in Yeasts
… closest relative S. paradoxus at high temperatures (39°C/102°F). The Impact One of the challenges in understanding … in energy and environment. Summary There are more than 1,000 species of yeasts and they vary in terms of genetics, … including biofuel production. Efforts such as the 1000 Fungal Genomics Project led by the DOE Joint Genome …
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