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Nitrogen fixation in Pampinifervens, a new species-rich genus of Aquificaceae that inhabits a wide pH range in terrestrial hot springs
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Low Mutation Rate and Atypical Mutation Spectrum in Prasinoderma coloniale: Insights From an Early Diverging Green Lineage
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Phylogenetically distinct fungal expansins show different binding preferences towards cellulosic materials and enhance cellulase activity
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… DNA outside a cell is key to interrogating what genes do, how they work, and applying them to environmental and energy … a series of case studies, JGI scientific users share how they’ve worked with the JGI DNA Synthesis Science … bioenergy crops: current progress and challenges , details how an interdisciplinary collaboration between three …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… This webinar focused on how the JGI employs single-molecule, long-read DNA sequences … Q&A from the Webinar: Input & sequencing Q(uestion): How much DNA is needed for “regular” vs the ultra-low input … are currently sequenced without pooling, which yields ~ 180 Gb of data per library. Q: How much DNA/coverage is …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… mode’, where they do very little.  SIP experiments can show which species actively munch on a specific chemical … this to untangle which microbes ate the compound and how much they ate.  These analyses provide granular insight … of an environment. For example, SIP experiments can show how soil microbes cycle nitrogen and carbon, or how …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… video, UC Merced undergraduate and graduate students share how their summer internship experiences have influenced … Vasquez : So this summer what I learned at the JGI is how to really work in the government lab. And I find this … internship is gonna help me in the future because it just showed me when people have a goal and passion for it, it’s …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… without a defined nucleus). Colder waters nearer the poles, however, tend to favor eukaryotes ( microorganisms with a … — with a desire to understand the nuance and gradation of how eukaryotic phytoplankton communities change with … waters that have an average surface temperature of about 58° Fahrenheit (14° Celsius) — a cool intermediate to the …
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Extracting the Secrets of Secondary Metabolites
… that quickly kill the host. Understanding exactly how P. luminescens and its secondary metabolites work could … researchers to delete or activate certain genes and assess how these edits affect functionality.  CRAGE allows for the … loss- and gain-of-function. The study’s analytical data shows peaks and valleys in secondary metabolites as genes are …
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JGI-KBase Panel at SACNAS
… session will demonstrate to students (and their mentors) how to begin establishing a professional presence through … designed for students to gain research experience and how students were able to use these experiences to get … and presenter opportunities. Attendees will learn how to identify their contributions using the Contributor …
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High quality permanent draft genome sequence of Chryseobacterium bovis DSM 19482T, isolated from raw cow milk
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Ecological Dichotomies Arise in Microbial Communities Due to Mixing of Deep Hydrothermal Waters and Atmospheric Gas in a Circumneutral Hot Spring
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