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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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Open Frameworks Training the Next Generation of Scientists
… provides training and scientific contributions—including sequencing services and analysis—to participants. Over the … faculty and researchers at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility, and the DOE … to become trainers for budding scientists and researchers.  Summary Myco-Ed was started to help expand limited …
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Fungus Fuels Tree Growth
… and root microbiomes to grow energy crops more efficiently. Summary To interrogate the close partnership of endophyte  … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, through its  … in order to get  M. elongata and  I. europaea  genomes sequenced and annotated for this study. The team found that, …
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Better Genome Editing for Bioenergy
… Cas9 needs guide RNA to lead it to the correct sequence to snip — but not all guides are effective. To … RNAs could be applied to other non-conventional organisms. Summary According to legend, Abraham Lincoln once said, … at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility. Y. lipolytica …
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Sequencing Technologies & Products
…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing … with Science Programs and Operations teams to enable the JGI’s focus on expanding molecular capabilities and … technology has been further scaled to a multiplexed DAP-seq (multiDAP-seq) method allowing high-throughput …
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FICUS-NERSC/KBASE
… expand upon highly successful past collaborations, the DOE JGI, NERSC and KBase issued a call for proposals in … as part of the FICUS initiative. Proposals submitted to the JGI-NERSC-KBase call do not use the Letter of Intent; rather … review cycle. All proposals undergo technical review by JGI staff as well as staff at the other participating …
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Fishing for Novel Cellulose Degraders
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … plethora of potential applications to industrial processes. Summary JGI researchers developed a function-driven, … pools, followed by whole genome amplification and shotgun sequencing. The team first tested the approach on bacterial …
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Viruses Reprogram Cells into Different Virocells
… can affect the interactions within their ecosystems. Summary Microbes drive the energy and nutrient cycles that … U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … in one proposed research project. For this project, RNA sequencing was done by the JGI, and proteomics and …
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VEGA Symposium
… 2026) General & Berkeley Lab Attendee – $300 Students & Postdocs – $250   Hosted by the DOE Joint Genome Institute, the … JGI Organizers … Jasmine Bunn , JGI Administrative Support …
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Nick Everson
… Mr. Everson rejoined the JGI in 2020  and leads all aspects of JGI Operations which include the Safety, Finance, Human … and Administration departments. He previously served as JGI’s Business Manager from 2007 to 2012, overseeing all … Deputy of Operations provides oversight and leadership of JGI operations infrastructure, including space and …
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Gene Expression: From On-Off Switch to Dial
… systems, expanding the technologies available for other JGI users outside the realm of bioenergy optimization. Summary Life is all about balance. This study,  recently … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Computationally Classifying Fungal Lifestyles
… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The … particularly regarding the effects of climate change. Summary A team led by researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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