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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and function. If a tree falls in … anyone registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds … a tremendous community effort, with over 100 researchers who nominated species for sequencing and then sent DNA and …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… of HudsonAlpha outline the questions they asked – and answered – in the study that recently appeared in the Proceedings of the National Academy of Sciences … finished analyzing the diversity present in 4X switchgrass, we were surprised by the number of 8X individuals that had …
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Plant Pan-Genomics Comes of Age
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… Jorge Arroyo lauded the partnership. Sindi also shared a message from Betsy Dumont , Dean of the UC Merced … and our diverse collaborators around the world. That said, we recognize that workforce in genomics, including JGI, is … in Visel’s Genomics of Plant-Microbial Interactions Group who has mentored several of the students including 2018 …
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Training the Next Generation of Talent
… New Graduate Internship Program Builds Bridges Between DOE JGI, UC Merced Days after presenting the results of … He arranged a meeting with the SNS dean, Juan Meza , who was very familiar with Berkeley Lab; he’d previously … by both Meza and DOE JGI Director Eddy Rubin. “QSB faculty are active DOE JGI Community Science Program collaborators, …
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JGI Pitches 2022 Visiting Faculty Program Collaborations
… one of which may be a graduate student. Applications are solicited annually for the summer term (May through … and travel expenses, both for faculty members and students who participate. The researchers who pitched potential collaborations were: Simon Roux and Matthew Kellom for the JGI Metagenome …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… a significant challenge in genomics. Enter GenomeOcean, a powerful generative model  now available to the global … to understand, generate and manipulate the human language—are well positioned to help enhance our understanding of life’s …
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Building Wet and Dry Lab Skills
… plant root exudates on the plant microbiome. This year, however, there was a new aspect to the project - they also … to the weather or practicing soccer with local Bay Area soccer teams – Zyiah plays on the AAMU women’s team and … the questions that you have. Because asking questions is a whole skillset, and both of you are really really good at …
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MGM Workshop at Fisabio Summer School
… biomedical research, the health sciences and related fields who are interested in learning and sharing concepts, tools and … this area, by means of theoretical lectures and seminars as well as practical hands-on sessions in bioinformatics and …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… working at the DOE Joint Genome Institute with Dan Rokhsar, who also holds a joint appointment with the University of … is often challenging because in many plants chromosomes are present in more than two copies, a condition known as … (due to extinction or you didn’t sample it). But once we deciphered the subgenomes we came up with a simple series …
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MGM Workshop at Fisabio Summer School 2025
… biomedical research, the health sciences and related fields who are interested in learning and sharing concepts, tools and … this area, by means of theoretical lectures and seminars as well as practical hands-on sessions in bioinformatics and …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic … to understand how the molecules in tiny microbes can impact whole ecosystems. Part of the reason he’s asking this …
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