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Natural Prodcast Episode 3: The Primer, Part 3
… we can find more things. Turns out some of the early genomes that were sequenced for, say, Streptomyces – they …
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JGI@25: Roots of a Mutualist Relationship
… (INRAE). Today, there are nearly 200 mycorrhizal fungal genomes publicly available on the fungal portal MycoCosm, many sequenced through the JGI 1000 Fungal Genomes Project.       Francis Martin on the main impact of …
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A Natural Mechanism Can Turbocharge Viral Evolution
… ago, a team discovered a group of viruses that had in their genomes a surprising tool: a “diversity generating … these DGRs. DGRs were found in single microbial and viral genomes, as well as genomes sampled all at once from the same environment, …
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Ancient Algae Reveal Secrets of Plant Evolution
… Laboratory (Berkeley Lab), scientists sequenced the genomes of four  Zygnematophyceae algae, which were isolated … in improving plant resilience and productivity. The algal genomes sequences are available on the JGI’s  PhycoCosm …
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JGI-UC Merced Interns Share Their 2021 Experiences
… Evaluation of Binning Tools for Microbial Eukaryotes in Metagenomes …
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Plant Microbial Interactions Group
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… Proposals aim to sequence and annotate genomes from Antarctica to Africa to global oceans. Through … for the accepted proposals, said Susannah Tringe, JGI User Programs Deputy. “These new CSP projects accelerate our efforts to characterize poorly-studied algal and viral genomes, and integrate with key DOE Office of Biological and …
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Soil virus offers insight into maintaining microorganisms
… were retrieved using the  JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) data portal. The IMG suite is … analysis and annotation of all publicly available genomes in three domains of life.  Using the IMG suite, JGI …
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10 From JGI on the 2019 Highly Cited Researchers List
… categories Microbial Systems research group lead and User Programs Deputy Susannah Tringe, Cross-Field category … a long-term project to sequence, annotate and analyze the genomes of more than 300 Aspergillus Go here to learn more …
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Fishing for Novel Cellulose Degraders
… To validate the predicted cellulases from their captured genomes, the team then used DNA synthesis and cloning, … form of functional enrichment leading to the sequencing of genomes from either individual cells or consortia of cells,” …
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Nigel Mouncey
… responsibilities toward the JGI internal scientific programs, the affiliated DOE National Laboratories, the … as a principal advisor to the Department of Energy biology programs, and represents the Joint Genome Institute at … Encyclopedia of Actinobacteria with 824 Isolate Reference Genomes. Cell Genomics 2: 100213 Nayfach S et al. 2021. A …
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Defining a Pan-Genome for Antarctic Archaea
… Analysis of haloarchaeal metagenomes broadens understanding of Antarctic biogeography. … variation in haloarchaea, they also characterized metagenomes (collections of partial genomes) from six hypersaline Antarctic lakes. The Impact By …
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