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… data portal , an interactive collection of sequenced algal genomes, omics data and comparative analysis tools. … are based upon? A: This is still work in progress as new genomes are being added. We do plan to publish the tree or … Q(uestion): Can you please explain again how did you pick genomes to be on the genomes portal? For the taxa I work on, …

… nearly 10,000 new annotations of fungal mitochondrial genomes — the DNA found inside mitochondria, the … mitochondrial annotations. Summary Mitochondrial genomes carry the genes responsible for oxidative … complex cells. Despite their biological importance, these genomes have resisted large-scale automated annotation due …

… To engineer yeast to do more, and understand genomes in general, Jef Boeke, Weimin Zhang (NYU Langone …

… designed to familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for …

… genetic material of uncultivated microbes and link their genomes to the roles they play in the environment. One … in Nature , applied single-cell sequencing to decode genomes of bacteria and archaea from previously understudied … honor,” said Axel Visel , JGI Deputy for Science Programs. “It clearly speaks to the enormous impact her …

… TBK Reddy gives an overview of the JGI's Genomes OnLine Database and why curated metadata matters. …

… workflows that allow researchers to easily analyze viral genomes. This includes (i) classifying viruses into groups … the quality and completeness of metagenome-assembled viral genomes ( Nature Biotechnology , 2021), geNomad , a tool for … robust methodologies for analyzing and understanding viral genomes and their interactions with microbial hosts. The …

… website. Since May 2019, v12 has not had any additional genomes added to it, nor had any feature updates. Phytozome  v13, which now hosts upwards of 250 plant genomes and has been under active development for over 5 … and genome version you’re after.  You can even grab genomes based on which version of Phytozome (e.g., 9, 10, …

…   DAN: Got it.    NANCY: And this is really to complete the genomes, and I’m really thankful for this. It sort of goes … do Illumina sequencing and we can get – thousands of fungal genomes are floating out there – some are private – that, … collaborate, let us know! Find out more at jgi.doe.gov/user-programs .   Thanks, and see you next time!  …

… of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in 2010 and has the combined Microbial Genomes and Metagenomes Program since 2011. Prior to joining … the quality and completeness of metagenome-assembled viral genomes. Nature Biotechnol . 39(5):578-585. Nayfach S, et …