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Natural Prodcast Episode 6: Marc Chevrette
… metabolism.  DAN: Hi again, and welcome to Episode 6 of Natural Prodcast. What you’re going to get here is the … that’s really popped up at funding agencies and the popular news recently because a lot of soldiers in the Iraq and … This is Episode 6 of Natural Prodcast, our conversation with Marc Chevrette, …
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Special Initiatives & Programs
… JGI (with the exceptions of DE-FOA-0003453 and DE-FOA-0003615 , which are both eligible for BERSS). Available … for BERSS. For DNA synthesis requests, the minimum is 100 kb, and for metabolomics, at least 22 samples are … utilize a core facility instead. Proposals may not exceed 10 Tbp sequencing, 500 kbp synthesis, and 200 polar/500 …
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Natural Prodcast Episode 12: Nadine Ziemert
… Europe. So if there are any kind of dated references to the news, that’s why. But it was a really fun conversation. And … all these very, very related genomes, right – on their 16S level, they’re almost identical! But seeing all these …
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Natural Prodcast Episode 16: Marcy Balunas
… so there are– I hesitate to make a guess but maybe 50 to 100 different strains and they are in individual tubules.  … in the field, these glacial bacteria grow slow and it’s not 100% clear that we know what their biological activities … in, I think, episode seven [Editor’s note: It was episode 6.] about this. And really his focus was on the evolution of …
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Complete genome sequence of Coraliomargarita akajimensis type strain (04OKA010-24T)
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Genomes OnLine Database (GOLD) v.10: new features and updates
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Natural Prodcast Episode 5: Brad Moore
… at the University of Hawaii and moved there in the early ’60s from Berkeley to work on this new budding field of … pairs. It was not linear, like Streptomyces , but circular. 10% of the genome encoded natural product pathways. Dan: … vehicles. Brad: You did not! Alison: I did, like 2016, I think. Yes, it was just so funny to hear how they’re …
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Natural Prodcast Episode 11: Marnix Medema
… tell a quick story. Looking back, the year was probably 2010, 2011, I was a, uh- actually, I’ve got the t-shirt on … for a while. Version 5 has been around for a bit. Version 6 is on the way, I hear? You just said. So antiSMASH is … field, many people had just been looking at like 16S taxonomic profiles of these communities looking at who is …
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Natural Prodcast Episode 4: Nancy Keller
… first started out the natural product community was almost 100% bacterial. Only people working in mycotoxins worked … do you check if they’re there? Like we always talk about 16S for bacteria, but we don’t talk about it so easily with … you look at the ITS region. That’s equivalent to the 16S. However, we did have a talk by Mark Stadler today who …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… people what that number is. BETSY PARKINSON: So micromolar, 10 to the negative 6th. Nanomolar, 10 to the negative 9th. Picomolar, 10 to the … back to us and we'll do a PCR analysis to sequence the 16S and things like that to figure out what they actually …
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Mining Metagenomes for Cas Proteins
… UC Berkeley news release  Smallest life forms have smallest working …
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A Community Resource for Secondary Metabolite Researchers
… is already the most comprehensive BGC database available at 10X the scale of the closest comparable database, and has … of Energy Joint Genome Institute (https:// ror.org/04xm1d337), a DOE Office of Science User Facility, is … SMC is the most comprehensive BGC database available at 10X the scale of the closest comparable database. …
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